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feat!: multi-ROI motion energy from binary masks, one NPZ per video - #46

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feat/multi-roi-masks

Oct 21, 2026

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feat!: multi-ROI motion energy from binary masks, one NPZ per video#46
1mattbecker merged 12 commits into
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feat/multi-roi-masks

Commits on Oct 8, 2026
- docs: add multi-ROI motion energy implementation plan
  
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- feat!: frame-align saved motion energy outputs to one value per frame
  
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- feat!: multi-ROI motion energy from binary masks in a single decode pass
  
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- test: size the 50-ROI viz fixture so it doesn't trip the area guard
  
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- docs: document multi-ROI masks, NPZ outputs and benchmarks; update example notebook
  
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- feat!: pad frame 0 with NaN instead of 0 in frame-aligned traces
  
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Commits on Oct 9, 2026
- fix: match annotator camera names, shorten plot labels, preallocate traces
  
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Commits on Oct 21, 2026
- feat!: rename metadata n_me_frames to n_diffs; add downstream migration list
  
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- feat!: store the NPZ's starting frame as a scalar first_frame, not a frame_index array
  
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- feat!: replace --format {npz,csv,both} with a --csv flag
  
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- feat: refuse an invalid --start-frame/--end-frame range up front
  
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- refactor!: simplify ROI handling to a dict of masks; return frame-aligned traces
  
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  6377e4d

Commits

Commits on Oct 8, 2026

Commits on Oct 9, 2026

Commits on Oct 21, 2026