Vivarium Collective
home of the vivarium simulation ecosystem
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- pbg-cpm Public
Native process-bigraph Cellular Potts Model (CPM) framework — fast 2D/3D Rust core, remaking CompuCell3D
vivarium-collective/pbg-cpm’s past year of commit activity - sms-api Public
SMS API - Design, run, and analyze simulations of dynamic cellular processes in Escherichia coli.
vivarium-collective/sms-api’s past year of commit activity - vEcoli-spatial-voronoi Public
vivarium-collective/vEcoli-spatial-voronoi’s past year of commit activity - pbg-chaste Public
Process-bigraph wrapper for the Chaste cell-based simulator, run via the chaste/pychaste Docker image.
vivarium-collective/pbg-chaste’s past year of commit activity - pbg-artistoo Public
Process-bigraph wrapper for the Artistoo Cellular Potts Model (real simulator via a Node.js bridge)
vivarium-collective/pbg-artistoo’s past year of commit activity
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