docs: point install at PyPI and add CI and PyPI badges - #3
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deepspotm 1.0.0 is on PyPI, so the install instructions no longer need the "when published" caveat or the git URL as the primary path. - README: `pip install deepspotm` is now the headline install, with the `[wsi]` extra documented for the predict_wsi.py example and the git install kept as the way to track the development branch. - Add a CI badge and a PyPI version badge. - Replace the hardcoded "Python 3.9+" badge with the dynamic pyversions badge. It was stale: requires-python is >=3.10, because torch, transformers, peft and lightning all require >=3.10. Reading it from PyPI keeps it honest if that floor moves again. - examples/predict_tcga_skcm.ipynb: install line goes back to `pip install deepspotm`, which now resolves. A downloads badge was left out deliberately; PyPI download stats are not populated yet and it currently renders as "package not found".
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deepspotm 1.0.0 is live on PyPI, so the README no longer needs the "when published" caveat.
pip install deepspotmis now the headline install; the[wsi]extra is documented forpredict_wsi.py, and the git URL is kept as the way to track the development branch.Python 3.9+badge with the dynamicpypi/pyversionsbadge. It was stale:requires-pythonis>=3.10because torch, transformers, peft and lightning all require it. Reading the value from PyPI keeps it correct if that floor moves again.examples/predict_tcga_skcm.ipynbinstall line goes back topip install deepspotm, which now resolves.Every badge URL was checked to render before committing. A downloads badge was left out on purpose: PyPI stats are not populated yet and it currently renders as "package not found". Worth adding in a day or so.