Issues

• ukf.py mis-parses --params when mixing flags with key/value args (stray '8' after --freeWater)

  pnlbwh/pnlNipype#131 · Filter by author ymokli opened on Oct 3, 2025

• save nhdr files

  pnlbwh/pnlNipype#129 · Filter by author RyanZurrin opened on May 28, 2025
  

• Remove submodules

  Backlog
  pnlbwh/pnlNipype#128 · Filter by author tashrifbillah opened on May 23, 2025
  1

• ZeroDivisionError: float division by zero - nifti_atlas on pnlpipe container

  pnlbwh/pnlNipype#121 · Filter by author kavandeloo97 opened on Dec 16, 2024

• Eddy has a future requirement!

  pnlbwh/pnlNipype#116 · Filter by author tashrifbillah opened on Sep 6, 2024
  

• FSL folks changed the name to eddy_cpu

  pnlbwh/pnlNipype#115 · Filter by author tashrifbillah opened on Sep 6, 2024
  

• Python version

  pnlbwh/pnlNipype#114 · Filter by author AlbertoImg opened on Jun 27, 2024
  2

• fsl_topup_epi_eddy Issue

  pnlbwh/pnlNipype#112 · Filter by author katerendall opened on Apr 9, 2024
  2

• Generalize makeAlignedMask so it can be reused to register arbitrary image pairs

  pnlbwh/pnlNipype#111 · Filter by author tashrifbillah opened on Nov 29, 2023

• Eddy_openmp

  pnlbwh/pnlNipype#110 · Filter by author kavandeloo opened on Nov 1, 2023
  3

• nifti_align error on Apple M2 Pro chip

  pnlbwh/pnlNipype#106 · Filter by author kavandeloo opened on Jul 5, 2023
  1

• DIPY unringing no longer works parallely

  pnlbwh/pnlNipype#105 · Filter by author tashrifbillah opened on Mar 22, 2023

• Error building ANTs related to MD5

  pnlbwh/pnlNipype#104 · Filter by author katiev1997 opened on Jan 27, 2023
  1

• Installation Help

  pnlbwh/pnlNipype#103 · Filter by author loulou-99 opened on Dec 14, 2022
  13

• [BUG] Update antsRegistrationsyn.sh

  pnlbwh/pnlNipype#93 · Filter by author tashrifbillah opened on Jan 5, 2022
  1

  

• Provide T1w in DWI space

  pnlbwh/pnlNipype#91 · Filter by author tashrifbillah opened on Oct 20, 2021

• recon-all -xmask

  pnlbwh/pnlNipype#86 · Filter by author tashrifbillah opened on Jul 26, 2021

• Hook up wo_repol_outDir removal to a --debug flag

  Future
  pnlbwh/pnlNipype#85 · Filter by author tashrifbillah opened on Jul 23, 2021

• BIDS convention naming of topup+eddy corrected data

  Discussion
  pnlbwh/pnlNipype#81 · Filter by author tashrifbillah opened on May 7, 2021
  8

• [Solution] BRAINSTools installation failure

  bugDiscussion
  pnlbwh/pnlNipype#63 · Filter by author tashrifbillah opened on Oct 20, 2020

• [update required] nib.load.get_fdata()

  pnlbwh/pnlNipype#54 · Filter by author tashrifbillah opened on Jul 9, 2020
  1

• Fourth parameter in --acqp for FSL eddy

  Discussion
  pnlbwh/pnlNipype#1 · Filter by author tashrifbillah opened on Jun 20, 2019
  1