Issues

• Say which Runtime API view the feature planner uses

  microbiomedata/nmdc-lakehouse#405 · Filter by author turbomam opened on Nov 3, 2026

• Support nmdc-schema 11.25.0 and its pre-releases as a source version

  microbiomedata/nmdc-lakehouse#395 · Filter by author turbomam opened on Oct 15, 2026

• Upload BER feature-model tables to BERDL

  microbiomedata/nmdc-lakehouse#388 · Filter by author turbomam opened on Oct 1, 2026
  1

• Say in the README which BER feature model version the feature tables follow

  microbiomedata/nmdc-lakehouse#382 · Filter by author turbomam opened on Sep 30, 2026

• Staged-content comparison fails on the first Spark Connect query, then passes on rerun

  microbiomedata/nmdc-lakehouse#375 · Filter by author turbomam opened on Sep 28, 2026
  5

• Plan retirement of historical NMDC lakehouse copies across catalog and storage

  microbiomedata/nmdc-lakehouse#367 · Filter by author turbomam opened on Sep 25, 2026
  3

• Simplify BERDL staging to a resumable run configuration

  microbiomedata/nmdc-lakehouse#353 · Filter by author turbomam opened on Sep 23, 2026
  6

• Match production exports to the deployed source schema version

  microbiomedata/nmdc-lakehouse#347 · Filter by author turbomam opened on Sep 22, 2026
  6

• Deprecate local schema generation and adopt TextValue string columns

  microbiomedata/nmdc-lakehouse#345 · Filter by author turbomam opened on Sep 21, 2026
  3

• Update source and flat-schema dependencies as a validated compatible pair

  microbiomedata/nmdc-lakehouse#343 · Filter by author turbomam opened on Sep 16, 2026

• Flattened output carries ARRAY columns the BRIDGE Data Catalog profile rejects

  microbiomedata/nmdc-lakehouse#342 · Filter by author turbomam opened on Sep 10, 2026
  4

• Verification cannot tell a legitimate row-count decrease from data loss; reconcile against nmdc_deleted

  microbiomedata/nmdc-lakehouse#338 · Filter by author turbomam opened on Sep 9, 2026
  1

• Promotion records no canonical snapshot ids, so its own recovery cannot be performed

  microbiomedata/nmdc-lakehouse#337 · Filter by author turbomam opened on Sep 9, 2026
  1

• Verify recovery to the destination snapshot from before replacement

  microbiomedata/nmdc-lakehouse#331 · Filter by author turbomam opened on Sep 8, 2026

• The download cache keys on URL path alone, so 2,733 MassIVE objects share one cache file

  bug
  microbiomedata/nmdc-lakehouse#325 · Filter by author turbomam opened on Sep 1, 2026

• 81 unverified markers point at a closed issue, so the pointer looks live and is dead

  bugdocumentationsmall
  microbiomedata/nmdc-lakehouse#316 · Filter by author turbomam opened on Aug 28, 2026
  1

• Closed issues are cited as open work in docs/, and nothing checks it

  bugdocumentationsmall
  microbiomedata/nmdc-lakehouse#312 · Filter by author turbomam opened on Aug 27, 2026
  2

• Eleven copies of the atomic file writer, two contracts, and one copy that lost its symlink check

  enhancementmedium
  microbiomedata/nmdc-lakehouse#305 · Filter by author turbomam opened on Aug 26, 2026

• 23 columns have no description, and the ones checked are gaps in nmdc-schema rather than losses here

  enhancementx small
  microbiomedata/nmdc-lakehouse#299 · Filter by author turbomam opened on Aug 25, 2026
  3

• Nothing watches whether the nmdc tenant holds non-NMDC data, or other tenants hold NMDC data

  enhancementmedium
  microbiomedata/nmdc-lakehouse#295 · Filter by author turbomam opened on Aug 24, 2026
  1

• Today's BERDL findings live in issue comments and memory, not in docs/

  documentationsmall
  microbiomedata/nmdc-lakehouse#294 · Filter by author turbomam opened on Aug 24, 2026
  2

• The flattened metadata schema has no version of its own, so no artifact can declare which schema wrote it

  enhancementmedium
  microbiomedata/nmdc-lakehouse#293 · Filter by author turbomam opened on Aug 24, 2026
  3

• Decide how to make the bare-reference rule precise enough to enforce

  decision neededsmall
  microbiomedata/nmdc-lakehouse#273 · Filter by author turbomam opened on Aug 21, 2026

• Three doctor modules duplicate labctl's probes for the same services

  enhancement
  microbiomedata/nmdc-lakehouse#261 · Filter by author turbomam opened on Aug 20, 2026

• Decide and record whether a COTS extractor replaces the MongoDB-to-Parquet plumbing

  decision needed
  microbiomedata/nmdc-lakehouse#260 · Filter by author turbomam opened on Aug 20, 2026