Add 1.12.1-dj branch: pin CaImAn for worker images on upstream v1.12.1 - #15

Draft

MilagrosMarin wants to merge 64 commits into

mainfrom

Commits on Jan 15, 2025

VERSION (dev) to 1.11.5 after release
pgunn
authored
a7d7fc9

Commits on Jan 18, 2025

Commits on Jan 22, 2025

Addresses #1454 using pyside6
pgunn
committed
8090e27
volpy_gui: change import errors based on a stackoverflow suggestion
pgunn
committed
db6ddac

Commits on Jan 24, 2025

Add pyside6 to pyproject - so many places to update things!
pgunn
committed
96d8a06

Commits on Jan 27, 2025

Add workaround to fix pyqtgraph issue 2380
pgunn
committed
d1236ec
volpy_gui: use limits keyword, which makes the menu actually work
pgunn
committed
66120c7
If we're going qt6, let's go qt6. Fix plugin path
pgunn
committed
6ef1051

Commits on Jan 29, 2025

Change all np.Inf to np.inf

Frank DeGuire
authored and
Frank DeGuire
committed
a663909

Commits on Jan 31, 2025

Commits on Feb 4, 2025

Forgot to add Kushal to the authors in pyproject
pgunn
committed
8d69792

Commits on Feb 5, 2025

Commits on Feb 7, 2025

Commits on Feb 11, 2025

cnmf.py:CNMF:fit() -- remove return value
pgunn
committed
383dcb8
CNNF:deconvolve() -- remove return value (and remove some old py2 code)
pgunn
committed
6d40c41
CNMF: remove hals methods (unused in the codebase, broken code)
pgunn
committed
99810c7
CNMF: remove return value of update_temporal, update_spatial, initialize
pgunn
committed
1dad866
Fix more stuff that used return value of cnmf.fit()
pgunn
committed
35ff29a
github tests: avoid defaults channel
pgunn
committed
34d28c2

Commits on Feb 12, 2025

Commits on Feb 26, 2025

Commits on Mar 4, 2025

Commits on Mar 14, 2025

Plumb init args up to initialize_components()
pgunn
committed
e1b5943

Commits on Mar 20, 2025

greedyROI param plumbing: update docs, get everything in a better shape
pgunn
committed
b93f4c8

Commits on Mar 25, 2025

Merge pull request #1478 from flatironinstitute/more_params_for_nmf
pgunn
authored
f4713d8

Commits on Mar 26, 2025

Commits on Apr 4, 2025

Fix missing datafile concern in #1467
pgunn
committed
66c73e7
Forgot to add avg_mask_fixed to list in caimanmanager
pgunn
committed
c38e761
seeded_CNMF notebook: Forgot a newline
pgunn
committed
db988c1

Commits on Apr 8, 2025

Merge pull request #1486 from flatironinstitute/fix_demo_seeded_notebook
pgunn
authored
aec3b0b

Commits on Apr 9, 2025

Merge pull request #1485 from flatironinstitute/spot_bad_params_for_huge_files
pgunn
authored
a05c96b

Commits on Apr 15, 2025

Fix refactoring mistake I made in commit 38436e1
pgunn
committed
8f0defc

Commits on Apr 17, 2025

Adjust background check so if there are no components we don't prod at them
pgunn
committed
64dfbad

Commits on Apr 25, 2025

Commits on May 8, 2025

Readme: more on env vars, install routes
pgunn
committed
d987e5e
Readme: Fix formatting goof
pgunn
committed
7ac6fad

Commits on May 13, 2025

VERSION to 1.12.1 in dev
pgunn
authored
28f7b4c
setup.py: Fix mistake in packaging new datafiles
pgunn
committed
881e627

Commits on May 29, 2026