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Improve CPG0016 CSV download workflows for analysis profiles and metadata - #6

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gwaybio merged 7 commits into
mainfrom
cpg0016_profile_source
Sep 8, 2026
Merged

gwaybio merged 7 commits into
mainfrom
cpg0016_profile_source

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@MattsonCam

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This pr improves the CPG0016 CSV download workflow by adding support for analysis profile CSV discovery and bulk download, introducing filtering by profile type and dataset source, and strengthening validation, reporting, and test coverage around these download paths. This allows the data to be downloaded in high-level chunks so it can be further processed for downstream tasks using less disk space.

@gwaybio
gwaybio merged commit de00ad1 into main Sep 8, 2026
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@gwaybio
gwaybio deleted the cpg0016_profile_source branch September 8, 2026 16:35
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2 participants