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Add --runDir option; make --workDir/--coordinationDir create-if-missing (#5516) - #5560

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issues/5516-runtime-storage-log-paths
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Add --runDir option; make --workDir/--coordinationDir create-if-missing (#5516)#5560
annagiroti wants to merge 11 commits into
masterfrom
issues/5516-runtime-storage-log-paths

Test derive_run_dir_defaults directly instead of via each entry point

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