Issues

default singularity cachedir

CCBR/CCBR_NextflowTemplate#89 · opened

on Aug 27, 2026

· 2026-10

2

Automated template synchronization

CCBR/CCBR_NextflowTemplate#77 · opened

on Jun 10, 2026

use version topic channel

CCBR/CCBR_NextflowTemplate#59 · opened

on Mar 24, 2026

nextflow parameters to deal with latency and high I/O issues on GPFS

CCBR/CCBR_NextflowTemplate#54 · opened

on Nov 11, 2025

set `-ansi-log false` when mode is slurm

CCBR/CCBR_NextflowTemplate#53 · opened

on Sep 9, 2025

· 2025-09

optional clean up step to delete workdir after successful pipeline completion

CCBR/CCBR_NextflowTemplate#52 · opened

on Aug 22, 2025

run jobby if mode=slurm

Feature

CCBR/CCBR_NextflowTemplate#45 · opened

on Mar 12, 2025

1

Refactor with new syntax for output definitions & topic channels

CCBR/CCBR_NextflowTemplate#28 · opened

on Jul 19, 2024

1

Glob argument for nextflow

CCBR/CCBR_NextflowTemplate#20 · opened

on Dec 19, 2023

single-source pipeline description for CLI

CCBR/CCBR_NextflowTemplate#19 · opened

on Nov 21, 2023

auto-generate contributors page

CCBR/CCBR_NextflowTemplate#14 · opened

on Sep 19, 2023

1

github action to check docs site for link rot

CCBR/CCBR_NextflowTemplate#8 · opened

on Aug 31, 2023

Consider using Quarto for documentation

CCBR/CCBR_NextflowTemplate#3 · opened

on Aug 10, 2023

Edit docs examples with nextflow-specific config

CCBR/CCBR_NextflowTemplate#2 · opened