Issues

Port SPLIT_FILES module to the nf-core structure
nf-core/rnasplice#300 · opened on Oct 1, 2026
Port MISOPY_SETTINGS module to the nf-core structure
nf-core/rnasplice#299 · opened on Oct 1, 2026
Port MISOPY_SASHIMIPLOT module to the nf-core structure
nf-core/rnasplice#298 · opened on Oct 1, 2026
Port MERGEEVENTS module to the nf-core structure
nf-core/rnasplice#297 · opened on Oct 1, 2026
Port DEXSEQ_EXON module to the nf-core structure
nf-core/rnasplice#296 · opened on Oct 1, 2026
Port CREATE_BAMLIST module to the nf-core structure
nf-core/rnasplice#295 · opened on Oct 1, 2026
Port CLUSTERGROUPS module to the nf-core structure
nf-core/rnasplice#294 · opened on Oct 1, 2026
Port tx2gene_tximport subworkflow to the nf-core structure
nf-core/rnasplice#293 · opened on Oct 1, 2026
Port suppa subworkflow to the nf-core structure
nf-core/rnasplice#292 · opened on Oct 1, 2026
support for long-read rnaseq
nf-core/rnasplice#181 · opened on Aug 24, 2025
no need to remove rRNA ?
nf-core/rnasplice#176 · opened on Jun 9, 2025
Option to run the pipeline with a subset a sample without running again Preprocessing, Alignment and quantification
nf-core/rnasplice#172 · opened on Apr 11, 2025
Global parameter for setting max intron length
nf-core/rnasplice#169 · opened on Feb 28, 2025
AWSmegatests are failing
nf-core/rnasplice#144 · opened on Jun 21, 2024
5
make contrasts file names consistent with those of the differentialabundance pipeline
nf-core/rnasplice#106 · opened on Dec 7, 2023
2