brainrender/pyproject.toml at main · brainglobe/brainrender · GitHub

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[project]
name = "brainrender"
authors = [
    { name = "Federico Claudi, Adam Tyson, Luigi Petrucco", email = "hello@brainglobe.info" },
]
description = "Visualisation and exploration of brain atlases and other anatomical data"
readme = "README.md"
requires-python = ">=3.12"
dynamic = ["version"]

dependencies = [
    "brainglobe-atlasapi>=2.0.1",
    "cloud-volume>=12",
    "brainglobe-space>=1.0.0",
    "brainglobe-utils>=0.5.0",
    "h5py",
    "k3d",
    "loguru",
    "meshio",
    "morphapi>=0.3.3",
    "msgpack",
    "myterial",
    "numpy",
    "pandas",
    "pooch",
    "pyinspect>=0.0.8",
    "pyyaml>=5.3",
    "requests",
    "tables",
    "vedo>=2025.5.3",
    "vtk<9.7.0"
]

license = { text = "BSD-3-Clause" }
classifiers = [
    "Development Status :: 3 - Alpha",
    "Programming Language :: Python",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: 3.14",
    "Operating System :: OS Independent",
    "License :: OSI Approved :: BSD License",
    "Intended Audience :: Developers",
    "Intended Audience :: Science/Research",
]

[project.urls]
Homepage = "https://brainglobe.info/"
"Source Code" = "https://github.com/brainglobe/brainrender"
"Bug Tracker" = "https://github.com/brainglobe/brainrender/issues"
Documentation = "https://brainglobe.info/documentation/brainrender/index.html"
"User Support" = "https://forum.image.sc/tag/brainglobe"

[project.optional-dependencies]
dev = [
    "pytest",
    "pytest-cov",
    "coverage",
    "black",
    "mypy",
    "pre-commit",
    "ruff",
    "setuptools_scm",
]
nb = ["jupyter", "k3d"]

[build-system]
requires = ["setuptools>=45", "wheel", "setuptools_scm[toml]>=6.2"]
build-backend = "setuptools.build_meta"

[tool.setuptools]
include-package-data = true

[tool.setuptools.packages.find]
include = ["brainrender*"]
exclude = ["tests*", "docs*", "examples*", "imgs*"]

[tool.pytest.ini_options]
addopts = "--cov=brainrender --cov-report=xml --color=yes -vv"
markers = [
    "slow: marks tests as slow (deselect with '-m \"not slow\"')",
    "local: marks test as local (not for CI)",
]

[tool.black]
target-version = ['py312', 'py313', 'py314']
skip-string-normalization = false
line-length = 79

[tool.setuptools_scm]

[tool.check-manifest]
ignore = [
    ".yaml",
    "tox.ini",
    "tests/",
    "tests/test_unit/",
    "tests/test_integration/",
    "docs/",
    "docs/source/",
]

# should revisit some of these.
[tool.ruff]
line-length = 79
exclude = ["__init__.py", "build", ".eggs", "examples"]
fix = true
ignore = ["E501", "E402"]

[tool.ruff.lint]
select = ["I", "E", "F"]