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<!DOCTYPE html>
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<title>Publications | Abrol Lab</title>
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<meta property="og:description" content="Browse our published research on GPCRs, protein structure, and computational biophysics">
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<h1 class="page-title fade-in">Publications</h1>
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<option value="2025">2025</option>
<option value="2024">2024</option>
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<!-- Publications List -->
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<!-- 2025 Publications -->
<div class="publications-year fade-in-up" data-year="2025">
<h2 class="year-title">2025</h2>
<div class="publications-list">
<a href="https://pubmed.ncbi.nlm.nih.gov/40358213/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">G Protein Selectivity in Dopamine Receptors is Determined
before GDP Release</h3>
<p class="publication-authors"><strong>Tawfeeq C</strong>, Hilibrand AS, Smith JS, <strong>Portillo J</strong>, Kruse AC,
<strong>Abrol R*</strong>
</p>
<p class="publication-venue"><em>Biochemistry</em>, 64(11):2439–2454 (2025)</p>
<div class="publication-meta">
<span>PMID: 40358213</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2025/G Protein Selectivity in Dopamine Receptors is Determined before GDP Release.jpeg"
alt="G Protein Selectivity in Dopamine Receptors">
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/40228037/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">IgStrand: A universal residue numbering scheme for the
immunoglobulin-fold (Ig-fold) to study Ig-proteomes and Ig-interactomes</h3>
<p class="publication-authors"><strong>Tawfeeq C</strong>, Wang J, Khaniya U, Madej T, Song J, <strong>Abrol
R*</strong>, Youkharibache P</p>
<p class="publication-venue"><em>PLoS Comput Biol</em>, 21(4):e1012813 (2025)</p>
<div class="publication-meta">
<span>PMID: 40228037</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2025/IgStrand.png" alt="IgStrand">
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/39984637/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Systemic HER3 ligand-mimicking nanobioparticles enter the
brain and reduce intracranial tumour growth</h3>
<p class="publication-authors">Alonso-Valenteen F, <strong>Mikhael S</strong>, Wang H, Sims J, Taguiam M, Teh
J, Sances S, Wong M, Miao T, Srinivas D, Gonzalez-Almeyda N, Cho RH, <strong>Sanchez R</strong>, Nguyenle
K, <strong>Serrano E</strong>, Ondatje B, Benhaghnazar RL, Gray HB, Gross Z, Yu J, Svendsen CN,
<strong>Abrol R</strong>, Medina-Kauwe LK
</p>
<p class="publication-venue"><em>Nature Nanotechnol</em>, 20(5):683–696 (2025)</p>
<div class="publication-meta">
<span>PMID: 39984637</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2025/Systemic HER3 ligand-mimicking nanobioparticles enter the brain and reduce intracranial tumour growth.png"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/39693934/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Thermodynamic role of receptor phosphorylation barcode in
cannabinoid receptor desensitization</h3>
<p class="publication-authors"><strong>Heo EH</strong>, <strong>Abrol R</strong></p>
<p class="publication-venue"><em>Biochem Biophys Res Commun</em>, 743:151100 (2025)</p>
<div class="publication-meta">
<span>PMID: 39693934</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2025/Thermodynamic role of receptor phosphorylation barcode in cannabinoid receptor desensitization.png"
alt="Thermodynamic role of receptor phosphorylation barcode">
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="#" class="publication-item">
<div class="publication-content">
<h3 class="publication-title">The Complementary Roles of CXCR4 and CXCR7 in Melanoma
Migration</h3>
<p class="publication-authors">Lacap R, Yousefi N, Hain S, Dahan N, Tran T, Gorgy J, <strong>Caguioa
R</strong>, Malone CS, <strong>Abrol R</strong>, de Bellard ME</p>
<p class="publication-venue"><em>OALib Journal</em> (2025)</p>
<div class="publication-meta">
<span>PMID: N/A</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2025/The Complementary Roles of CXCR4 and CXCR7 in Melanoma Migration.png"
alt="The Complementary Roles of CXCR4 and CXCR7 in Melanoma Migration">
</div>
<div class="publication-badge">Journal Article</div>
</a>
</div>
</div>
<!-- 2024 Publications -->
<div class="publications-year fade-in-up" data-year="2024">
<h2 class="year-title">2024</h2>
<div class="publications-list">
<a href="https://pubmed.ncbi.nlm.nih.gov/39543045/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Ig or Not Ig? That Is the Question: The Nucleating
Supersecondary Structure of the Ig-Fold and the Extended Ig Universe</h3>
<p class="publication-authors">Wang J, <strong>Abrol R</strong>, Youkharibache P</p>
<p class="publication-venue"><em>Methods Mol Biol</em>, 2870:371–396 (2024)</p>
<div class="publication-meta">
<span>PMID: 39543045</span>
</div>
</div>
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<div class="publication-image-placeholder">
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<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/38750247/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Identification of Gα12- vs- Gα13-coupling determinants and
development of a Gα12/13-coupled designer GPCR</h3>
<p class="publication-authors">Tatsumi M, <strong>Cruz C</strong>, Kamakura N, Kuwabara R, Nakamura G, Ikuta
T, <strong>Abrol R</strong>, Inoue A</p>
<p class="publication-venue"><em>Scientific Reports</em>, 14(1):11119 (2024)</p>
<div class="publication-meta">
<span>PMID: 38750247</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2024/dentification of Gα12-vs-Gα13-coupling determinants and development of a Gα12:13-coupled designer GPCR.png"
alt="Identification of Gα12-vs-Gα13-coupling determinants">
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/38220423/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Towards a structural and functional analysis of the
immunoglobulin-fold proteome</h3>
<p class="publication-authors"><strong>Tawfeeq C</strong>, Song J, Khaniya U, Madej T, Wang J,
Youkharibache P, <strong>Abrol R*</strong>
</p>
<p class="publication-venue"><em>Adv Protein Chem Struct Biol</em>, 138:135–178 (2024)</p>
<div class="publication-meta">
<span>PMID: 38220423</span>
</div>
</div>
<div class="publication-image">
<img src="images/publications/2024/Towards a structural and functional analysis of the immunoglobulin-fold proteome.png"
alt="Towards a structural and functional analysis of the immunoglobulin-fold proteome">
</div>
<div class="publication-badge review">Review Article</div>
</a>
</div>
</div>
<!-- 2022 Publications -->
<div class="publications-year fade-in-up" data-year="2022">
<h2 class="year-title">2022</h2>
<div class="publications-list">
<a href="https://pubmed.ncbi.nlm.nih.gov/35926384/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Three-stage model of helical membrane protein folding: Role of
membrane–water interface as the intermediate vestibule for TM helices during their in
membrano assembly</h3>
<p class="publication-authors"><strong>Kawamala B-K</strong>, <strong>Abrol R*</strong></p>
<p class="publication-venue"><em>Biochem Biophys Res Commun</em>, 624:1–7 (2022)</p>
<div class="publication-meta">
<span>PMID: 35926384</span>
</div>
</div>
<div class="publication-image">
<div class="publication-image-placeholder">
<div class="publication-image">
<img src="images/publications/2022/Three-stage model of helical membrane protein folding.png"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
</div>
</div>
<div class="publication-badge">Journal Article</div>
</a>
</div>
</div>
<!-- 2021 Publications -->
<div class="publications-year fade-in-up" data-year="2021">
<h2 class="year-title">2021</h2>
<div class="publications-list">
<a href="https://pubmed.ncbi.nlm.nih.gov/35034722/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Development of Enhanced Conformational Sampling Methods to
Probe the Activation Landscape of GPCRs</h3>
<p class="publication-authors"><strong>Abrol R*</strong>, <strong>Serrano E</strong>, <strong>Santiago LJ</strong></p>
<p class="publication-venue"><em>Membrane Proteins (Adv Protein Chem Struct Biol)</em>, Ed.
Rossen Donev, 128:325–359 (2021)</p>
<div class="publication-meta">
<span>PMID: 35034722</span>
</div>
</div>
<div class="publication-image">
<div class="publication-image-placeholder">
<div class="publication-image">
<img src="images/publications/2021/Development of enhanced conformational sampling methods to probe the activation landscape of GPCRs.jpg"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
</div>
</div>
<div class="publication-badge review">Review Article</div>
</a>
</div>
</div>
<!-- 2020 Publications -->
<div class="publications-year fade-in-up" data-year="2020">
<h2 class="year-title">2020</h2>
<div class="publications-list">
<a href="https://pubmed.ncbi.nlm.nih.gov/32593908/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">The complex role of the N-terminus and acidic residues of HdeA
as pH-dependent switches in its chaperone function</h3>
<p class="publication-authors"><strong>Pacheco S</strong>, Widjaja MA, Gomez JS, Crowhurst
KA, <strong>Abrol R*</strong></p>
<p class="publication-venue"><em>Biophysical Chemistry</em>, 264:106406 (2020)</p>
<div class="publication-meta">
<span>PMID: 32593908</span>
</div>
</div>
<div class="publication-image">
<div class="publication-image">
<img src="images/publications/2020/The complex role of the N-terminus and acidic residues of HdeA as pH-dependent switches in its chaperone function.jpg"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/32189026/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Pseudo-Symmetric Assembly of Protodomains as a Common
Denominator in the Evolution of Polytopic Helical Membrane Proteins</h3>
<p class="publication-authors">Youkharibache P, <strong>Tran A</strong>, <strong>Abrol
R*</strong></p>
<p class="publication-venue"><em>Journal of Molecular Evolution</em>, 88(4):319–344 (2020)
</p>
<div class="publication-meta">
<span>PMID: 32189026</span>
</div>
</div>
<div class="publication-image">
<div class="publication-image">
<img src="images/publications/2020/Pseudo-Symmetric Assembly of Protodomains as a Common Denominator in the Evolution of Polytopic Helical Membrane Proteins.png"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
</div>
<div class="publication-badge">Journal Article</div>
</a>
</div>
</div>
<!-- 2019 Publications -->
<div class="publications-year fade-in-up" data-year="2019">
<h2 class="year-title">2019</h2>
<div class="publications-list">
<a href="https://pubmed.ncbi.nlm.nih.gov/31653051/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">Understanding G protein selectivity of muscarinic
acetylcholine receptors using computational methods</h3>
<p class="publication-authors"><strong>Santiago LJ</strong>, <strong>Abrol R*</strong></p>
<p class="publication-venue"><em>Int J Mol Sci</em>, 20(21):E5290 (2019)</p>
<div class="publication-meta">
<span>PMID: 31653051</span>
</div>
</div>
<div class="publication-image">
<div class="publication-image">
<img src="images/publications/2019/Understanding G Protein Selectivity of Muscarinic Acetylcholine Receptors Using Computational Methods.png"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/31617560/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">HER3-targeted protein chimera forms endosomolytic capsomeres
and self-assembles into stealth nucleocapsids for systemic tumor homing of RNA
interference in vivo</h3>
<p class="publication-authors">Alonso-Valenteen F, <strong>Pacheco S</strong>, Srinivas D, Rentsendorj A, Chu
D, Lubow J, Sims J, Miao T, <strong>Mikhael S</strong>, Hwang JY, <strong>Abrol R*</strong>,
Medina-Kauwe L
</p>
<p class="publication-venue"><em>Nucleic Acids Research</em>, 47(21):11020–11043 (2019)</p>
<div class="publication-meta">
<span>PMID: 31617560</span>
</div>
</div>
<div class="publication-image">
<div class="publication-image">
<img src="images/publications/2019/HER3-targeted protein chimera forms endosomolytic capsomeres and self-assembles.png"
alt="Systemic HER3 ligand-mimicking nanobioparticles">
</div>
</div>
<div class="publication-badge">Journal Article</div>
</a>
<a href="https://pubmed.ncbi.nlm.nih.gov/31226372/" target="_blank" rel="noopener noreferrer"
class="publication-item">
<div class="publication-content">
<h3 class="publication-title">A beetle antifreeze protein protects lactate dehydrogenase
under freeze-thawing</h3>
<p class="publication-authors">Rodriguez C, <strong>Sajjadi S</strong>, <strong>Abrol R*</strong>,
Wen X
</p>
<p class="publication-venue"><em>Int J Biol Macromolecules</em>, 136:1153–1160 (2019)</p>
<div class="publication-meta">
<span>PMID: 31226372</span>
</div>
</div>
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<a href="https://pubmed.ncbi.nlm.nih.gov/30821046/" target="_blank" rel="noopener noreferrer"
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<h3 class="publication-title">Chiral Graphs: Reduced Representations of Ligand Scaffolds for
Stereoselective Biomolecular Recognition, Drug Design, and Enhanced Exploration of
Chemical Structure Space</h3>
<p class="publication-authors"><strong>Mikhael S</strong>, <strong>Abrol R*</strong></p>
<p class="publication-venue"><em>ChemMedChem</em>, 14(8):798–809 (2019)</p>
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<span>PMID: 30821046</span>
<span>Invited Communication</span>
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