PET/pyproject.toml at main · Python-Ensemble-Toolbox/PET · GitHub

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[build-system]
requires = ["setuptools>=64", "setuptools-scm>=8", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "PET"
# Derived from the latest git tag by setuptools-scm (v0.2 -> 0.2;
# commits after it -> 0.3.devN+g<hash>). Release by pushing a tag.
dynamic = ["version"]
description = "Python Ensemble Toolbox"
authors = [
  { name = "Data assimilation and optimization group" }
]
maintainers = [
  { name = "Kristian Fossum", email = "krfo@norceresearch.no" },
  { name = "Rolf J. Lorentzen", email = "rolo@norceresearch.no" }
]
license = { file = "LICENSE" }
readme = "README.md"
requires-python = ">=3.12,<3.15"
classifiers = [
    "Development Status :: 4 - Beta",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: 3.14",
    "Topic :: Scientific/Engineering",
]
dependencies = [
    "numpy",
    "scipy",
    "matplotlib",
    "h5py",
    "tqdm",
    "PyWavelets",
    "geostat @ git+https://github.com/Python-Ensemble-Toolbox/Geostatistics@3f9f0c876815db140fae3404d322892190cb6728",
    "graphite-maps>=0.0.11,<0.1",
    "pandas",
    "p_tqdm",
    "tomli",
    "tomli-w",
    "pyyaml",
    "sympy",
]

[project.scripts]
pet = "pet_cli.__main__:main"

[project.optional-dependencies]
minires = [
    # Pure-Python two-phase TPFA simulator, ref src/simulator/minires.py.
    # Optional: keeps the toy simulator out of the core dependency set.
    "minires>=0.3.2",
]
dev = [
    "pytest",
    "pytest-cov",
    "ruff",
]
doc = [
    "mkdocs-material",
    "mkdocstrings",
    "mkdocstrings-python",
    "mkdocs-gen-files",
    "mkdocs-literate-nav",
    "mkdocs-section-index",
    "mkdocs-glightbox",
    "mkdocs-jupyter",
    "pybtex"
]

[project.urls]
Homepage = "https://github.com/Python-Ensemble-Toolbox/PET"

[tool.setuptools]
package-dir = {"" = "src"}

[tool.setuptools.packages.find]
where = ["src"]

[tool.setuptools_scm]
# Used when building without git metadata, e.g. from a source zip.
fallback_version = "0.0.0"

[tool.pytest.ini_options]
testpaths = ["tests"]
markers = [
    "slow: end-to-end assimilation with a parallel forecast; deselect with -m 'not slow'",
]

[tool.ruff]
line-length = 120
target-version = "py310"

[tool.ruff.lint]
select = ["E", "F", "W"]
ignore = [
    "E501",  # line length is handled by formatting, not a hard error
    "F403",  # star imports are used intentionally to flatten package namespaces
    "F405",
    "E741",  # single-letter names (l, I, ...) are idiomatic in this numerical/linear-algebra codebase
]

[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401"]  # intentional namespace re-exports
"src/misc/grdecl.py" = ["E722", "E741", "F821"]  # vendored parser; F821 is dead Python-2-only code
"src/misc/ecl.py" = ["E722", "E741"]
"src/misc/grid/sector.py" = ["E722", "E741"]
"src/misc/grid/unstruct.py" = ["F841"]  # untested legacy grid parser; allocations look WIP, not dead code