flowagent/pyproject.toml at main · EnteloBio/flowagent · GitHub

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[build-system]
requires = ["setuptools>=68.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "flowagent"
version = "0.2.0"
description = "Multi-agent framework for automating bioinformatics workflows"
readme = "README.md"
license = {text = "GPL-3.0-only"}
requires-python = ">=3.10"
dependencies = [
    "pydantic>=2.0.0",
    "pydantic-settings>=2.0.0",
    "python-dotenv>=1.0.0",
    "openai>=1.0.0",
    "anthropic>=0.40.0",
    "google-genai>=1.0.0",
    "networkx>=3.0",
    "rich>=13.0.0",
    "typing-extensions>=4.0.0",
    "aiohttp>=3.8.0",
    "click>=8.0.0",
    "PyYAML>=6.0.0",
    "Jinja2>=3.1.0",
    "matplotlib>=3.7.0",
    "nbformat>=5.0.0",
    "nbconvert>=7.0.0",
]

[project.optional-dependencies]
hpc = [
    "cgatcore>=0.6.7",
    "drmaa>=0.7.9",
]
kubernetes = [
    "kubernetes>=28.1.0",
]
web = [
    "fastapi>=0.115.0",
    "uvicorn[standard]>=0.30.0",
    "sse-starlette>=2.0.0",
]
dev = [
    "pytest>=7.0.0",
    "pytest-asyncio>=0.21.0",
    "black>=23.0.0",
    "flake8>=6.0.0",
    "mypy>=1.0.0",
]
all = [
    "flowagent[hpc,kubernetes,web,dev]",
]

[project.scripts]
flowagent = "flowagent.cli:run"

[tool.setuptools.packages.find]
include = ["flowagent*"]

[tool.pytest.ini_options]
asyncio_mode = "auto"
testpaths = ["tests"]